RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06790.1 View Network Show in Genome Browser |
| Other Names | Os06g0163400 |
| Description | OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3199337-3203979 Nucleotide Length: 1602 |
| Protein-coding | LOC_Os06g06790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02524 LOC_Os02g02410 LOC_Os01g37960 LOC_Os02g35900 LOC_Os03g55820 LOC_Os02g53400 LOC_Os01g68480 LOC_Os01g07376 LOC_Os01g42960 LOC_Os04g38310 LOC_Os02g07230 More.. |
| Downstream Genes | LOC_Os09g32526 LOC_Os07g14270 LOC_Os08g33440 LOC_Os08g29110 LOC_Os07g08840 LOC_Os09g23650 LOC_Os06g15620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06790.1 |
| Rice Genome Annotation | LOC_Os06g06790.1 |
| Ricechip | LOC_Os06g06790.1 |
| KEGG | osa:4340223 dosa:Os06t0163400-01 |
| Entrez-Gene | 4340223 |