RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g06880.1 View Network Show in Genome Browser |
| Other Names | Os06g0164100 |
| Description | Ser/Thr protein phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3263799-3267308 Nucleotide Length: 969 |
| Protein-coding | LOC_Os06g06880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13640 LOC_Os04g33470 LOC_Os05g23610 LOC_Os05g46570 LOC_Os04g18010 LOC_Os03g63590 LOC_Os01g72220 LOC_Os03g15430 LOC_Os02g16550 LOC_Os02g03050 LOC_Os03g27950 More.. |
| Downstream Genes | LOC_Os11g15570 LOC_Os06g21470 LOC_Os10g29560 LOC_Os09g39590 LOC_Os12g07050 LOC_Os11g34710 LOC_Os07g48840 LOC_Os07g02090 LOC_Os08g10570 LOC_Os11g16390 LOC_Os10g02750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g06880.1 |
| Rice Genome Annotation | LOC_Os06g06880.1 |
| Ricechip | LOC_Os06g06880.1 |
| KEGG | osa:4340228 dosa:Os06t0164100-02 |
| Entrez-Gene | 4340228 |