RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07090.1 View Network Show in Genome Browser |
| Other Names | Os06g0167100 |
| Description | AP-1 complex subunit gamma-1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3376566-3386549 Nucleotide Length: 2613 |
| Protein-coding | LOC_Os06g07090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g23950 LOC_Os05g46550 LOC_Os01g50770 LOC_Os03g59660 LOC_Os03g57040 LOC_Os05g27320 LOC_Os01g12880 LOC_Os04g51120 LOC_Os01g74180 LOC_Os01g53670 LOC_Os03g02170 More.. |
| Downstream Genes | LOC_Os12g01390 LOC_Os11g01380 LOC_Os07g10150 LOC_Os11g42160 LOC_Os07g12200 LOC_Os07g12170 LOC_Os10g36830 LOC_Os06g22650 LOC_Os07g42810 LOC_Os08g43560 LOC_Os10g05800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07090.1 |
| Rice Genome Annotation | LOC_Os06g07090.1 |
| Ricechip | LOC_Os06g07090.1 |
| KEGG | osa:4340249 dosa:Os06t0167100-01 |
| Entrez-Gene | 4340249 |