RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07120.1 View Network Show in Genome Browser |
| Other Names | Os06g0167400 |
| Description | dehydrodolichyl diphosphate synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3405164-3407737 Nucleotide Length: 900 |
| Protein-coding | LOC_Os06g07120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41300 LOC_Os03g38230 LOC_Os01g55360 LOC_Os02g03460 LOC_Os01g73450 LOC_Os04g33300 LOC_Os02g24612 LOC_Os03g10080 LOC_Os02g10260 LOC_Os05g36000 LOC_Os01g52400 More.. |
| Downstream Genes | LOC_Os10g17990 LOC_Os12g35630 LOC_Os08g25290 LOC_Os07g38300 LOC_Os08g12840 LOC_Os08g31810 LOC_Os11g38810 LOC_Os07g42450 LOC_Os07g16960 LOC_Os06g14510 LOC_Os11g32240 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00900 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07120.1 |
| Rice Genome Annotation | LOC_Os06g07120.1 |
| Ricechip | LOC_Os06g07120.1 |
| KEGG | osa:4340251 dosa:Os06t0167400-01 |
| Entrez-Gene | 4340251 |