RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07160.1 View Network Show in Genome Browser |
| Other Names | Os06g0168000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3428699-3433505 Nucleotide Length: 1014 |
| Protein-coding | LOC_Os06g07160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28280 LOC_Os03g63400 LOC_Os04g50990 LOC_Os05g45270 LOC_Os03g38980 LOC_Os02g37862 LOC_Os03g58430 LOC_Os04g46620 LOC_Os03g22340 LOC_Os01g10820 LOC_Os05g48290 More.. |
| Downstream Genes | LOC_Os07g42300 LOC_Os06g46372 LOC_Os08g33920 LOC_Os07g08660 LOC_Os07g47780 LOC_Os08g09350 LOC_Os09g39500 LOC_Os11g01420 LOC_Os07g10300 LOC_Os08g09940 LOC_Os09g37280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07160.1 |
| Rice Genome Annotation | LOC_Os06g07160.1 |
| Ricechip | LOC_Os06g07160.1 |
| KEGG | osa:4340255 dosa:Os06t0168000-01 |
| Entrez-Gene | 4340255 |