RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07350.1 View Network Show in Genome Browser |
| Other Names | Os06g0170500 |
| Description | RNA-binding motif protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3536682-3540238 Nucleotide Length: 1449 |
| Protein-coding | LOC_Os06g07350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g30430 LOC_Os04g32340 LOC_Os03g61110 LOC_Os03g21140 LOC_Os02g39720 LOC_Os02g14780 LOC_Os02g29480 LOC_Os02g40340 LOC_Os04g03796 LOC_Os06g04660 LOC_Os01g05510 More.. |
| Downstream Genes | LOC_Os06g11370 LOC_Os11g42040 LOC_Os06g08840 LOC_Os10g16440 LOC_Os11g45850 LOC_Os11g45840 LOC_Os11g45820 LOC_Os11g13410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07350.1 |
| Rice Genome Annotation | LOC_Os06g07350.1 |
| Ricechip | LOC_Os06g07350.1 |
| KEGG | osa:4340263 dosa:Os06t0170500-01 |
| Entrez-Gene | 4340263 |