RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07474.1 View Network Show in Genome Browser |
| Other Names | Os06g0171600 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3588217-3595865 Nucleotide Length: 1035 |
| Protein-coding | LOC_Os06g07474 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38520 LOC_Os01g47350 LOC_Os03g40260 LOC_Os03g48830 |
| Downstream Genes | LOC_Os11g16290 LOC_Os06g41930 LOC_Os06g30130 LOC_Os06g50980 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07474.1 |
| Rice Genome Annotation | LOC_Os06g07474.1 |
| Ricechip | LOC_Os06g07474.1 |
| KEGG | osa:4340267 dosa:Os06t0171600-01 |
| Entrez-Gene | 4340267 |