RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07480.1 View Network Show in Genome Browser |
| Other Names | Os06g0171700 |
| Description | CDK-activating kinase assembly factor MAT1 family protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3596001-3598293 Nucleotide Length: 588 |
| Protein-coding | LOC_Os06g07480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08280 LOC_Os05g32600 LOC_Os03g18690 LOC_Os03g19059 LOC_Os01g49680 LOC_Os02g10640 LOC_Os03g57870 LOC_Os02g03060 LOC_Os06g07140 LOC_Os05g28010 LOC_Os02g02510 More.. |
| Downstream Genes | LOC_Os09g25550 LOC_Os07g49150 LOC_Os07g22840 LOC_Os11g26910 LOC_Os09g36830 LOC_Os10g25770 LOC_Os07g07610 LOC_Os12g37400 LOC_Os06g07978 LOC_Os06g07878 LOC_Os12g07720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07480.1 |
| Rice Genome Annotation | LOC_Os06g07480.1 |
| Ricechip | LOC_Os06g07480.1 |
| KEGG | osa:4340268 dosa:Os06t0171700-01 |
| Entrez-Gene | 4340268 |