RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07960.1 View Network Show in Genome Browser |
| Other Names | Os06g0175800 |
| Description | cystathionine gamma-synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3870164-3870916 Nucleotide Length: 1152 |
| Protein-coding | LOC_Os06g07960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42660 LOC_Os06g07860 LOC_Os03g53650 LOC_Os01g66580 LOC_Os03g29260 LOC_Os04g36890 LOC_Os01g74650 LOC_Os04g08350 LOC_Os01g53450 LOC_Os05g46580 LOC_Os01g59920 More.. |
| Downstream Genes | LOC_Os07g46750 LOC_Os07g42300 LOC_Os12g42980 LOC_Os10g41150 LOC_Os06g36840 LOC_Os06g19680 LOC_Os06g36880 LOC_Os07g37100 LOC_Os08g14330 LOC_Os09g20090 LOC_Os06g37080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07960.1 |
| Rice Genome Annotation | LOC_Os06g07960.1 |
| Ricechip | LOC_Os06g07960.1 |
| KEGG | osa:4340283 dosa:Os06t0175800-01 |
| Entrez-Gene | 4340283 |