RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g07969.1 View Network Show in Genome Browser |
| Other Names | Os06g0177000 |
| Description | cytochrome b-c1 complex subunit 8, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3872355-3874569 Nucleotide Length: 219 |
| Protein-coding | LOC_Os06g07969 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g07905 LOC_Os06g07869 LOC_Os06g05880 LOC_Os03g38520 LOC_Os01g46980 LOC_Os05g03150 LOC_Os02g36974 LOC_Os03g40920 LOC_Os04g35300 LOC_Os02g54700 LOC_Os02g48720 More.. |
| Downstream Genes | LOC_Os06g08005 LOC_Os12g32950 LOC_Os06g50970 LOC_Os08g18110 LOC_Os06g37180 LOC_Os09g38740 LOC_Os12g38310 LOC_Os11g03380 LOC_Os08g39500 LOC_Os10g11260 LOC_Os07g45090 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g07969.1 |
| Rice Genome Annotation | LOC_Os06g07969.1 |
| Ricechip | LOC_Os06g07969.1 |
| KEGG | osa:9268052 dosa:Os06t0177000-01 |
| Entrez-Gene | 9268052 |