RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g08140.1 View Network Show in Genome Browser |
| Other Names | Os06g0179700 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3947926-3952251 Nucleotide Length: 1083 |
| Protein-coding | LOC_Os06g08140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56560 LOC_Os03g18630 LOC_Os01g13060 LOC_Os04g42700 LOC_Os01g63280 LOC_Os05g30820 LOC_Os02g40860 LOC_Os02g09359 LOC_Os01g38950 LOC_Os01g26280 LOC_Os04g52860 More.. |
| Downstream Genes | LOC_Os06g42800 LOC_Os10g12620 LOC_Os06g49170 LOC_Os07g05370 LOC_Os10g33650 LOC_Os07g35700 LOC_Os09g29510 LOC_Os07g43570 LOC_Os10g02250 LOC_Os07g35300 LOC_Os10g17960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g08140.1 |
| Rice Genome Annotation | LOC_Os06g08140.1 |
| Ricechip | LOC_Os06g08140.1 |
| KEGG | osa:4340303 dosa:Os06t0179700-01 |
| Entrez-Gene | 4340303 |