RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g08170.1 View Network Show in Genome Browser |
| Other Names | Os06g0179900 |
| Description | transporter, major facilitator family, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 3961923-3964854 Nucleotide Length: 1416 |
| Protein-coding | LOC_Os06g08170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g44430 LOC_Os03g59450 LOC_Os02g44730 LOC_Os02g02190 LOC_Os02g02170 LOC_Os01g17240 |
| Downstream Genes | LOC_Os11g08370 LOC_Os09g39680 LOC_Os09g38410 LOC_Os09g20480 LOC_Os07g37510 LOC_Os11g32900 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g08170.1 |
| Rice Genome Annotation | LOC_Os06g08170.1 |
| Ricechip | LOC_Os06g08170.1 |
| KEGG | osa:4340305 dosa:Os06t0179900-01 |
| Entrez-Gene | 4340305 |