RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g08320.1 View Network Show in Genome Browser |
| Other Names | Os06g0181566 |
| Description | 60S ribosomal protein L39, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4033795-4034043 Nucleotide Length: 108 |
| Protein-coding | LOC_Os06g08320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g35090 LOC_Os01g22490 LOC_Os05g06770 LOC_Os01g60790 LOC_Os02g34460 LOC_Os03g04590 LOC_Os02g56960 LOC_Os03g56241 LOC_Os02g02130 LOC_Os01g51020 LOC_Os02g56990 More.. |
| Downstream Genes | LOC_Os08g39500 LOC_Os10g32920 LOC_Os08g02340 LOC_Os11g41610 LOC_Os12g05430 LOC_Os09g24690 LOC_Os08g02410 LOC_Os07g07709 LOC_Os08g03450 LOC_Os08g03640 LOC_Os09g39500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g08320.1 |
| Rice Genome Annotation | LOC_Os06g08320.1 |
| Ricechip | LOC_Os06g08320.1 |
| KEGG | osa:9268459 dosa:Os06t0181566-01 |
| Entrez-Gene | 9268459 |