RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g08770.1 View Network Show in Genome Browser |
| Other Names | Os06g0186900 |
| Description | ruvB-like 2, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4388209-4391753 Nucleotide Length: 1431 |
| Protein-coding | LOC_Os06g08770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62040 LOC_Os03g22900 LOC_Os04g09860 LOC_Os05g46330 LOC_Os01g73310 LOC_Os05g01600 LOC_Os05g48930 LOC_Os06g04580 LOC_Os03g61970 LOC_Os02g51730 LOC_Os02g15220 More.. |
| Downstream Genes | LOC_Os07g08170 LOC_Os08g09320 LOC_Os11g06390 LOC_Os12g39070 LOC_Os10g36650 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os06g37180 LOC_Os09g26880 More.. |
| Reference | |
|---|---|
| PubMed | 21771866 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g08770.1 |
| Rice Genome Annotation | LOC_Os06g08770.1 |
| Ricechip | LOC_Os06g08770.1 |
| KEGG | osa:4340348 dosa:Os06t0186900-01 |
| Entrez-Gene | 4340348 |