RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g08840.3 View Network Show in Genome Browser |
| Other Names | Os06g0187900 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4428666-4432336 Nucleotide Length: 558 |
| Protein-coding | LOC_Os06g08840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05310 LOC_Os01g27940 LOC_Os02g12850 LOC_Os02g58090 LOC_Os02g13990 LOC_Os04g39444 LOC_Os02g37430 LOC_Os03g50850 LOC_Os04g41100 LOC_Os02g39010 LOC_Os02g52140 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os10g02630 LOC_Os10g06130 LOC_Os07g47630 LOC_Os06g21470 LOC_Os07g07220 LOC_Os11g14430 LOC_Os11g43620 LOC_Os08g05530 LOC_Os07g32430 LOC_Os08g34480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g08840.3 |
| Rice Genome Annotation | LOC_Os06g08840.3 |
| Ricechip | LOC_Os06g08840.3 |
| KEGG | osa:4340353 dosa:Os06t0187900-01 |
| Entrez-Gene | 4340353 |