RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09170.1 View Network Show in Genome Browser |
| Other Names | Os06g0191200 |
| Description | zinc ion binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4612249-4615892 Nucleotide Length: 1059 |
| Protein-coding | LOC_Os06g09170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23590 LOC_Os03g50430 LOC_Os02g10920 LOC_Os01g59980 LOC_Os04g40650 LOC_Os01g07070 LOC_Os04g41470 LOC_Os01g18100 LOC_Os03g60460 LOC_Os02g50230 LOC_Os02g45650 More.. |
| Downstream Genes | LOC_Os08g41010 LOC_Os09g12800 LOC_Os12g22620 LOC_Os07g22024 LOC_Os09g19790 LOC_Os06g47210 LOC_Os12g19090 LOC_Os08g30810 LOC_Os09g12570 LOC_Os12g41220 LOC_Os07g30980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1320-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09170.1 |
| Rice Genome Annotation | LOC_Os06g09170.1 |
| Ricechip | LOC_Os06g09170.1 |
| KEGG | osa:4340366 dosa:Os06t0191200-01 |
| Entrez-Gene | 4340366 |