RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09290.1 View Network Show in Genome Browser |
| Other Names | Os06g0192600 |
| Description | 26S protease regulatory subunit 7, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4667486-4670980 Nucleotide Length: 1281 |
| Protein-coding | LOC_Os06g09290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21970 LOC_Os03g63430 LOC_Os03g18690 LOC_Os04g56646 LOC_Os01g32800 LOC_Os04g40850 LOC_Os03g11570 LOC_Os02g05340 LOC_Os01g16190 LOC_Os05g30800 LOC_Os03g13970 More.. |
| Downstream Genes | LOC_Os07g25420 LOC_Os07g49150 LOC_Os08g43640 LOC_Os09g37000 LOC_Os08g43540 LOC_Os09g36710 LOC_Os06g48640 LOC_Os09g15750 LOC_Os08g03390 LOC_Os08g12820 LOC_Os06g40560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09290.1 |
| Rice Genome Annotation | LOC_Os06g09290.1 |
| Ricechip | LOC_Os06g09290.1 |
| KEGG | osa:4340376 dosa:Os06t0192600-01 |
| Entrez-Gene | 4340376 |