RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09330.1 View Network Show in Genome Browser |
| Other Names | Os06g0193000 |
| Description | ubiquitin-conjugating enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4690734-4695316 Nucleotide Length: 723 |
| Protein-coding | LOC_Os06g09330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62244 LOC_Os05g38550 LOC_Os03g11440 LOC_Os03g15350 LOC_Os02g51430 LOC_Os04g58800 LOC_Os03g50440 LOC_Os01g44130 LOC_Os01g03520 LOC_Os02g58640 LOC_Os05g48620 More.. |
| Downstream Genes | LOC_Os06g19680 LOC_Os09g17840 LOC_Os09g17830 LOC_Os09g12570 LOC_Os09g15320 LOC_Os08g28680 LOC_Os10g11260 LOC_Os12g41220 LOC_Os10g10500 LOC_Os06g37180 LOC_Os07g10600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09330.1 |
| Rice Genome Annotation | LOC_Os06g09330.1 |
| Ricechip | LOC_Os06g09330.1 |
| KEGG | osa:4340379 dosa:Os06t0193000-01 |
| Entrez-Gene | 4340379 |