RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09340.1 View Network Show in Genome Browser |
| Other Names | Os06g0193200 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4700489-4703227 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os06g09340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41500 LOC_Os04g44910 LOC_Os04g44900 LOC_Os01g26174 LOC_Os03g17780 LOC_Os03g07820 LOC_Os03g20949 LOC_Os03g29850 LOC_Os04g12580 LOC_Os01g03820 LOC_Os01g26280 More.. |
| Downstream Genes | LOC_Os10g30540 LOC_Os08g10330 LOC_Os09g22450 LOC_Os12g04220 LOC_Os10g02970 LOC_Os07g31460 LOC_Os11g04460 LOC_Os08g10300 LOC_Os08g10290 LOC_Os08g31890 LOC_Os09g29510 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09340.1 |
| Rice Genome Annotation | LOC_Os06g09340.1 |
| Ricechip | LOC_Os06g09340.1 |
| KEGG | osa:4340380 dosa:Os06t0193200-01 |
| Entrez-Gene | 4340380 |