RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09450.2 View Network Show in Genome Browser |
| Other Names | Os06g0194900 |
| Description | sucrose synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4796286-4802578 Nucleotide Length: 2427 |
| Protein-coding | LOC_Os06g09450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g34000 LOC_Os03g11560 LOC_Os03g08300 LOC_Os01g46430 LOC_Os01g43380 LOC_Os04g58090 LOC_Os03g24460 LOC_Os05g05270 LOC_Os01g68950 LOC_Os04g17660 LOC_Os01g69030 More.. |
| Downstream Genes | LOC_Os09g12530 LOC_Os12g39340 LOC_Os06g43630 LOC_Os07g42440 LOC_Os08g20660 LOC_Os07g41340 LOC_Os11g12810 |
| Reference | |
|---|---|
| PubMed | 9063969 1534703 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09450.2 |
| Rice Genome Annotation | LOC_Os06g09450.2 |
| Ricechip | LOC_Os06g09450.2 |
| KEGG | osa:4340386 dosa:Os06t0194900-01 |
| Entrez-Gene | 4340386 |