RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09540.1 View Network Show in Genome Browser |
| Other Names | Os06g0195600 |
| Description | SAC domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4844482-4854759 Nucleotide Length: 2412 |
| Protein-coding | LOC_Os06g09540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12300 LOC_Os02g34884 LOC_Os03g28140 LOC_Os02g05030 |
| Downstream Genes | LOC_Os11g20384 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09540.1 |
| Rice Genome Annotation | LOC_Os06g09540.1 |
| Ricechip | LOC_Os06g09540.1 |
| KEGG | osa:4340387 dosa:Os06t0195600-01 |
| Entrez-Gene | 4340387 |