RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09610.1 View Network Show in Genome Browser |
| Other Names | Os06g0196300 |
| Description | peroxiredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4888548-4890731 Nucleotide Length: 798 |
| Protein-coding | LOC_Os06g09610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48420 LOC_Os01g16152 LOC_Os01g74650 LOC_Os01g39270 LOC_Os01g69950 LOC_Os03g39830 LOC_Os02g51470 LOC_Os05g09400 LOC_Os04g18200 LOC_Os01g48690 LOC_Os03g10060 More.. |
| Downstream Genes | LOC_Os06g42000 LOC_Os07g11110 LOC_Os07g30670 LOC_Os12g39370 LOC_Os07g37830 LOC_Os11g13850 LOC_Os09g10760 LOC_Os09g39180 LOC_Os09g34140 LOC_Os09g10750 LOC_Os07g37250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09610.1 |
| Rice Genome Annotation | LOC_Os06g09610.1 |
| Ricechip | LOC_Os06g09610.1 |
| KEGG | osa:4340391 dosa:Os06t0196300-01 |
| Entrez-Gene | 4340391 |