RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09630.1 View Network Show in Genome Browser |
| Other Names | Os06g0196600 |
| Description | 3-oxoacyl-synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4897179-4900565 Nucleotide Length: 1398 |
| Protein-coding | LOC_Os06g09630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18590 LOC_Os03g63930 LOC_Os05g31290 LOC_Os03g22950 LOC_Os03g39860 LOC_Os02g30060 LOC_Os04g30760 LOC_Os04g55060 LOC_Os05g34950 LOC_Os01g46380 LOC_Os03g26620 More.. |
| Downstream Genes | LOC_Os09g36860 LOC_Os11g31900 LOC_Os08g43580 LOC_Os12g34890 LOC_Os07g12150 LOC_Os12g13930 LOC_Os12g07010 LOC_Os11g06750 LOC_Os07g08330 LOC_Os07g10660 LOC_Os12g08170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09630.1 |
| Rice Genome Annotation | LOC_Os06g09630.1 |
| Ricechip | LOC_Os06g09630.1 |
| KEGG | osa:4340392 dosa:Os06t0196600-01 |
| Entrez-Gene | 4340392 |