RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09679.1 View Network Show in Genome Browser |
| Other Names | Os06g0196900 |
| Description | chaperonin, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4933905-4938500 Nucleotide Length: 759 |
| Protein-coding | LOC_Os06g09679 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02380 LOC_Os03g04970 LOC_Os02g01280 LOC_Os03g64210 LOC_Os05g46290 LOC_Os05g48290 LOC_Os03g59020 LOC_Os05g05470 LOC_Os03g42220 LOC_Os02g14929 LOC_Os02g22780 More.. |
| Downstream Genes | LOC_Os12g17910 LOC_Os10g32550 LOC_Os09g38980 LOC_Os10g37060 LOC_Os06g47320 LOC_Os06g34690 LOC_Os06g36700 LOC_Os07g42450 LOC_Os09g32976 LOC_Os08g23710 LOC_Os08g03640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09679.1 |
| Rice Genome Annotation | LOC_Os06g09679.1 |
| Ricechip | LOC_Os06g09679.1 |
| KEGG | osa:4340394 dosa:Os06t0196900-03 |
| Entrez-Gene | 4340394 |