RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g09717.1 View Network Show in Genome Browser |
| Other Names | Os06g0197600 |
| Description | ethylene-responsive transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 4960147-4960770 Nucleotide Length: 624 |
| Protein-coding | LOC_Os06g09717 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g09679 LOC_Os06g02380 LOC_Os02g54710 LOC_Os02g57670 LOC_Os03g54040 LOC_Os03g24020 LOC_Os04g36800 LOC_Os03g49710 LOC_Os02g51480 LOC_Os03g62630 |
| Downstream Genes | LOC_Os12g17910 LOC_Os10g41710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g09717.1 |
| Rice Genome Annotation | LOC_Os06g09717.1 |
| Ricechip | LOC_Os06g09717.1 |