RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g09930.1 View Network Show in Genome Browser
Other Names	Os06g0199800
Description	G protein coupled receptor, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 5060660-5065027 Nucleotide Length: 966
Protein-coding	LOC_Os06g09930

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0004872	receptor activity	Molecular Function	IEA
GO:0004871	signal transducer activity	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g26890 LOC_Os03g16010 LOC_Os05g48240 LOC_Os05g27520 LOC_Os05g26926 LOC_Os05g26902 LOC_Os02g57640
Downstream Genes	LOC_Os10g37520 LOC_Os11g07910 LOC_Os06g36590 LOC_Os08g44010 LOC_Os09g33450

miRNA Regulations
miRNAs	osa-miR5809

Reference
PubMed	21778827

Database Links
Gramene	LOC_Os06g09930.1
Rice Genome Annotation	LOC_Os06g09930.1
Ricechip	LOC_Os06g09930.1
KEGG	osa:4340409 dosa:Os06t0199800-01
Entrez-Gene	4340409