RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g10280.1 View Network Show in Genome Browser |
| Other Names | Os06g0204400 |
| Description | CDP-alcohol phosphatidyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5276590-5285926 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os06g10280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51380 LOC_Os01g49190 LOC_Os01g57930 LOC_Os02g03110 LOC_Os05g47980 LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os01g19470 LOC_Os02g02410 More.. |
| Downstream Genes | LOC_Os06g37180 LOC_Os09g08910 LOC_Os07g48780 LOC_Os06g48750 LOC_Os08g19850 LOC_Os06g29650 LOC_Os11g09280 LOC_Os11g26850 LOC_Os06g21560 LOC_Os06g30460 LOC_Os06g45670 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g10280.1 |
| Rice Genome Annotation | LOC_Os06g10280.1 |
| Ricechip | LOC_Os06g10280.1 |
| KEGG | osa:4340428 dosa:Os06t0204400-01 |
| Entrez-Gene | 4340428 |