RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g10340.1 View Network Show in Genome Browser |
| Other Names | Os06g0205000 |
| Description | autophagy-related protein 12, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5308992-5310602 Nucleotide Length: 282 |
| Protein-coding | LOC_Os06g10340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02570 LOC_Os01g42850 LOC_Os03g16130 LOC_Os04g57480 LOC_Os04g53240 LOC_Os02g05310 LOC_Os04g41990 LOC_Os02g14780 LOC_Os01g03070 LOC_Os04g54350 LOC_Os04g45040 More.. |
| Downstream Genes | LOC_Os12g32210 LOC_Os08g09240 LOC_Os07g32800 LOC_Os06g44030 LOC_Os11g01510 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os12g01520 LOC_Os10g41110 LOC_Os07g49230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g10340.1 |
| Rice Genome Annotation | LOC_Os06g10340.1 |
| Ricechip | LOC_Os06g10340.1 |
| KEGG | osa:4340429 dosa:Os06t0205000-01 |
| Entrez-Gene | 4340429 |