RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g10600.1 View Network Show in Genome Browser
Other Names	Os06g0208100,Os06g0207966
Description	homeobox and START domains containing protein, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 5499342-5502411 Nucleotide Length: 2094
Protein-coding	LOC_Os06g10600

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g48930 LOC_Os05g29870 LOC_Os05g36090 LOC_Os03g03164 LOC_Os01g47760 LOC_Os01g56990 LOC_Os01g64810 LOC_Os01g70100 LOC_Os02g08544
Downstream Genes	LOC_Os10g33930 LOC_Os10g31770 LOC_Os10g35250 LOC_Os10g40590 LOC_Os11g43640 LOC_Os11g32960 LOC_Os09g33450 LOC_Os06g51220 LOC_Os08g05870 LOC_Os08g42370 LOC_Os08g19650 More..

Database Links
Gramene	LOC_Os06g10600.1
Rice Genome Annotation	LOC_Os06g10600.1
Ricechip	LOC_Os06g10600.1
KEGG	osa:4340445 dosa:Os06t0208100-00 dosa:Os06t0207966-00
Entrez-Gene	4340445