RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g10660.1 View Network Show in Genome Browser |
| Other Names | Os06g0208800 |
| Description | lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5559909-5563097 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os06g10660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49250 LOC_Os01g53840 LOC_Os03g21460 |
| Downstream Genes | LOC_Os10g34420 LOC_Os09g34100 |
| Reference | |
|---|---|
| PubMed | 22872757 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g10660.1 |
| Rice Genome Annotation | LOC_Os06g10660.1 |
| Ricechip | LOC_Os06g10660.1 |
| KEGG | osa:4340448 dosa:Os06t0208800-01 |
| Entrez-Gene | 4340448 |