RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g10690.1 View Network Show in Genome Browser |
| Other Names | Os06g0209300 |
| Description | PHD-finger domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5575867-5584373 Nucleotide Length: 3420 |
| Protein-coding | LOC_Os06g10690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g09620 LOC_Os01g16180 LOC_Os04g14510 LOC_Os03g40010 LOC_Os04g39090 LOC_Os05g18770 LOC_Os03g49600 LOC_Os03g48970 |
| Downstream Genes | LOC_Os10g42950 LOC_Os07g10520 LOC_Os06g44030 LOC_Os10g29274 LOC_Os09g39420 LOC_Os11g09979 LOC_Os08g35000 LOC_Os10g40990 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g10690.1 |
| Rice Genome Annotation | LOC_Os06g10690.1 |
| Ricechip | LOC_Os06g10690.1 |
| KEGG | osa:4340450 dosa:Os06t0209300-01 |
| Entrez-Gene | 4340450 |