RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g10990.1 View Network Show in Genome Browser |
| Other Names | Os06g0212900 |
| Description | DnaK family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5745188-5747209 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os06g10990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02620 LOC_Os02g43930 LOC_Os03g44620 LOC_Os05g46620 LOC_Os05g06440 LOC_Os04g46390 LOC_Os03g61730 LOC_Os03g57340 LOC_Os05g26926 LOC_Os05g26902 LOC_Os02g10220 More.. |
| Downstream Genes | LOC_Os12g07060 LOC_Os09g32050 LOC_Os07g44310 LOC_Os08g41110 LOC_Os08g06460 LOC_Os07g03270 LOC_Os12g41820 LOC_Os12g31840 LOC_Os08g36140 LOC_Os07g28800 LOC_Os10g42439 More.. |
| Reference | |
|---|---|
| PubMed | 22984070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g10990.1 |
| Rice Genome Annotation | LOC_Os06g10990.1 |
| Ricechip | LOC_Os06g10990.1 |
| KEGG | osa:4340470 dosa:Os06t0212900-01 |
| Entrez-Gene | 4340470 |