RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11090.1 View Network Show in Genome Browser |
| Other Names | Os06g0214300 |
| Description | CXE carboxylesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5813468-5815196 Nucleotide Length: 969 |
| Protein-coding | LOC_Os06g11090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g50270 LOC_Os03g16920 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g62230 LOC_Os01g61920 LOC_Os04g46910 LOC_Os02g45650 More.. |
| Downstream Genes | LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os12g43340 LOC_Os07g30090 LOC_Os08g38300 LOC_Os11g47760 LOC_Os10g37670 LOC_Os07g20170 LOC_Os09g26160 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11090.1 |
| Rice Genome Annotation | LOC_Os06g11090.1 |
| Ricechip | LOC_Os06g11090.1 |
| KEGG | osa:4340476 dosa:Os06t0214300-01 |
| Entrez-Gene | 4340476 |