RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11380.1 View Network Show in Genome Browser |
| Other Names | Os06g0217600 |
| Description | geminivirus Rep-interacting motor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 5982669-5987671 Nucleotide Length: 1668 |
| Protein-coding | LOC_Os06g11380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003774 | motor activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g31040 LOC_Os03g14690 |
| Downstream Genes | LOC_Os12g43660 LOC_Os11g44810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11380.1 |
| Rice Genome Annotation | LOC_Os06g11380.1 |
| Ricechip | LOC_Os06g11380.1 |
| KEGG | osa:4340497 dosa:Os06t0217600-01 |
| Entrez-Gene | 4340497 |