RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11450.1 View Network Show in Genome Browser |
| Other Names | Os06g0218300 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6058726-6060541 Nucleotide Length: 1329 |
| Protein-coding | LOC_Os06g11450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54010 LOC_Os01g53810 LOC_Os02g57710 LOC_Os01g53800 LOC_Os01g68620 |
| Downstream Genes | LOC_Os11g24540 LOC_Os06g51430 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11450.1 |
| Rice Genome Annotation | LOC_Os06g11450.1 |
| Ricechip | LOC_Os06g11450.1 |
| KEGG | osa:4340502 dosa:Os06t0218300-01 |
| Entrez-Gene | 4340502 |