RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11490.1 View Network Show in Genome Browser |
| Other Names | Os06g0218600 |
| Description | plastocyanin-like domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6086289-6097662 Nucleotide Length: 597 |
| Protein-coding | LOC_Os06g11490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52630 LOC_Os01g54620 LOC_Os02g33550 LOC_Os03g03164 LOC_Os03g16610 LOC_Os05g28520 LOC_Os03g60340 LOC_Os02g22380 LOC_Os02g19640 LOC_Os05g48270 LOC_Os05g20050 More.. |
| Downstream Genes | LOC_Os06g30950 LOC_Os10g10080 LOC_Os09g13650 LOC_Os08g41890 LOC_Os09g07350 LOC_Os07g01370 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR408-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11490.1 |
| Rice Genome Annotation | LOC_Os06g11490.1 |
| Ricechip | LOC_Os06g11490.1 |
| KEGG | osa:4340504 dosa:Os06t0218600-01 |
| Entrez-Gene | 4340504 |