RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11620.1 View Network Show in Genome Browser |
| Other Names | Os06g0219600 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6155940-6159888 Nucleotide Length: 615 |
| Protein-coding | LOC_Os06g11620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07070 LOC_Os05g24970 LOC_Os05g48960 LOC_Os02g57010 LOC_Os01g74340 LOC_Os02g39720 LOC_Os01g36570 LOC_Os01g72890 LOC_Os05g30410 LOC_Os04g56760 LOC_Os05g43450 More.. |
| Downstream Genes | LOC_Os07g32430 LOC_Os08g37960 LOC_Os10g06130 LOC_Os07g47630 LOC_Os07g36940 LOC_Os11g41820 LOC_Os07g13280 LOC_Os10g02630 LOC_Os07g33330 LOC_Os06g40600 LOC_Os08g34480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11620.1 |
| Rice Genome Annotation | LOC_Os06g11620.1 |
| Ricechip | LOC_Os06g11620.1 |
| KEGG | osa:4340509 dosa:Os06t0219600-01 |
| Entrez-Gene | 4340509 |