RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11730.1 View Network Show in Genome Browser |
| Other Names | Os06g0220600 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6208293-6214438 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os06g11730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03140 LOC_Os05g30980 LOC_Os02g15310 LOC_Os05g02250 LOC_Os04g46910 LOC_Os03g60580 LOC_Os03g56790 LOC_Os03g13950 LOC_Os02g44470 LOC_Os01g71200 LOC_Os03g59550 More.. |
| Downstream Genes | LOC_Os09g37720 LOC_Os09g29980 LOC_Os06g50890 LOC_Os12g43340 LOC_Os10g37670 LOC_Os07g30090 LOC_Os07g20170 LOC_Os08g29650 LOC_Os12g38430 LOC_Os08g38240 LOC_Os06g48310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11730.1 |
| Rice Genome Annotation | LOC_Os06g11730.1 |
| Ricechip | LOC_Os06g11730.1 |
| KEGG | osa:4340517 dosa:Os06t0220600-01 |
| Entrez-Gene | 4340517 |