RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g11790.1 View Network Show in Genome Browser |
| Other Names | Os06g0221100 |
| Description | TLD family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6243660-6247719 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os06g11790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25070 LOC_Os03g18310 LOC_Os03g01990 LOC_Os03g05570 LOC_Os03g39000 LOC_Os01g16670 LOC_Os05g07130 LOC_Os03g09140 LOC_Os03g59390 LOC_Os02g55970 LOC_Os02g07900 More.. |
| Downstream Genes | LOC_Os12g12860 LOC_Os07g44710 LOC_Os10g37630 LOC_Os10g34420 LOC_Os08g44260 LOC_Os06g51360 LOC_Os09g15480 LOC_Os07g42770 LOC_Os10g36710 LOC_Os07g31370 LOC_Os07g44330 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g11790.1 |
| Rice Genome Annotation | LOC_Os06g11790.1 |
| Ricechip | LOC_Os06g11790.1 |
| KEGG | osa:4340521 dosa:Os06t0221100-01 |
| Entrez-Gene | 4340521 |