RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g12250.1 View Network Show in Genome Browser
Other Names	Os06g0226950
Description	sphingolipid C4-hydroxylase SUR2, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 6589792-6591799 Nucleotide Length: 795
Protein-coding	LOC_Os06g12250

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0005794	Golgi apparatus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g15490 LOC_Os03g56820 LOC_Os01g57350 LOC_Os04g56620 LOC_Os02g12740 LOC_Os03g49480 LOC_Os01g48690 LOC_Os05g38360 LOC_Os03g21530 LOC_Os02g40870 LOC_Os03g29170 More..
Downstream Genes	LOC_Os12g43363 LOC_Os07g08760 LOC_Os08g25900 LOC_Os09g10750 LOC_Os08g41250 LOC_Os12g29760 LOC_Os07g10830 LOC_Os07g37580 LOC_Os09g38530 LOC_Os07g07000 LOC_Os11g31640 More..

Pathways
KEGG Pathways	rn00627 rn01120 rn00363 rn00624 rn00945 rn01110 rn00903 rn00600 rn01100 rn00905

Database Links
Gramene	LOC_Os06g12250.1
Rice Genome Annotation	LOC_Os06g12250.1
Ricechip	LOC_Os06g12250.1
KEGG	osa:9268279 dosa:Os06t0226950-01
Entrez-Gene	9268279