RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os06g12370.1 View Network Show in Genome Browser |
Other Names | Os06g0229066,Os06g0229000 |
Description | OsFtsH6 FtsH protease, homologue of AtFtsH6, expressed |
Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6701247-6704416 Nucleotide Length: 2046 |
Protein-coding | LOC_Os06g12370 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os05g49230 LOC_Os03g60750 LOC_Os02g16670 LOC_Os06g06190 LOC_Os02g08490 LOC_Os06g05820 LOC_Os01g62420 LOC_Os06g04610 LOC_Os05g49970 LOC_Os04g39060 LOC_Os01g38970 More.. |
Downstream Genes | LOC_Os07g42632 LOC_Os06g49140 LOC_Os09g27270 LOC_Os10g36860 LOC_Os07g09720 LOC_Os09g36450 LOC_Os09g34010 LOC_Os07g44410 LOC_Os07g07310 LOC_Os08g44210 |
Pathways | |
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KEGG Pathways | rn00860 rn01100 rn01110 |
Metacyc Pathways | CHLOROPHYLL-SYN |
Database Links | |
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Gramene | LOC_Os06g12370.1 |
Rice Genome Annotation | LOC_Os06g12370.1 |
Ricechip | LOC_Os06g12370.1 |
KEGG | osa:9268843 osa:4340563 dosa:Os06t0229066-00dosa:Os06t0229000-01 |
Entrez-Gene | 9268843 |