RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12390.1 View Network Show in Genome Browser |
| Other Names | Os06g0229200 |
| Description | galactosyltransferase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6715886-6722017 Nucleotide Length: 1914 |
| Protein-coding | LOC_Os06g12390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54370 LOC_Os03g58900 LOC_Os03g58920 LOC_Os03g48610 LOC_Os02g48620 |
| Downstream Genes | LOC_Os11g32070 LOC_Os07g09670 LOC_Os07g09690 LOC_Os08g03670 LOC_Os12g41956 LOC_Os09g38570 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12390.1 |
| Rice Genome Annotation | LOC_Os06g12390.1 |
| Ricechip | LOC_Os06g12390.1 |
| KEGG | osa:4340564 dosa:Os06t0229200-01 |
| Entrez-Gene | 4340564 |