RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12500.1 View Network Show in Genome Browser |
| Other Names | Os06g0231050 |
| Description | membrane associated DUF588 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6788986-6790050 Nucleotide Length: 555 |
| Protein-coding | LOC_Os06g12500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g27790 LOC_Os03g10870 LOC_Os01g47200 |
| Downstream Genes | LOC_Os12g38100 LOC_Os11g34730 LOC_Os09g07480 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12500.1 |
| Rice Genome Annotation | LOC_Os06g12500.1 |
| Ricechip | LOC_Os06g12500.1 |
| KEGG | osa:9272689 dosa:Os06t0231050-00 |
| Entrez-Gene | 9272689 |