RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12530.1 View Network Show in Genome Browser |
| Other Names | Os06g0231300 |
| Description | CS domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6794150-6796570 Nucleotide Length: 927 |
| Protein-coding | LOC_Os06g12530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55270 LOC_Os03g45270 LOC_Os01g43540 LOC_Os02g07490 LOC_Os02g53420 LOC_Os03g43890 LOC_Os03g22810 LOC_Os03g16920 LOC_Os04g46910 LOC_Os03g02260 LOC_Os02g44470 More.. |
| Downstream Genes | LOC_Os08g27070 LOC_Os12g43630 LOC_Os11g04070 LOC_Os08g03640 LOC_Os12g03880 LOC_Os06g36700 LOC_Os08g36150 LOC_Os07g46990 LOC_Os06g45590 LOC_Os12g43340 LOC_Os07g30090 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12530.1 |
| Rice Genome Annotation | LOC_Os06g12530.1 |
| Ricechip | LOC_Os06g12530.1 |
| KEGG | osa:4340572 dosa:Os06t0231300-01 |
| Entrez-Gene | 4340572 |