RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12610.1 View Network Show in Genome Browser |
| Other Names | Os06g0232300 |
| Description | auxin efflux carrier component, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6866393-6869521 Nucleotide Length: 1779 |
| Protein-coding | LOC_Os06g12610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60230 LOC_Os04g38570 LOC_Os02g45460 LOC_Os05g48880 LOC_Os03g06350 |
| Downstream Genes | LOC_Os08g09190 LOC_Os09g31478 LOC_Os09g38130 LOC_Os08g45030 LOC_Os09g38210 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12610.1 |
| Rice Genome Annotation | LOC_Os06g12610.1 |
| Ricechip | LOC_Os06g12610.1 |
| KEGG | osa:4340580 dosa:Os06t0232300-01 |
| Entrez-Gene | 4340580 |