RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12630.1 View Network Show in Genome Browser |
| Other Names | Os06g0232600 |
| Description | glutathione S-transferase, N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6890585-6895613 Nucleotide Length: 819 |
| Protein-coding | LOC_Os06g12630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23620 LOC_Os01g70960 LOC_Os01g49710 LOC_Os04g35560 LOC_Os03g04260 LOC_Os02g12800 LOC_Os04g32660 LOC_Os02g32120 LOC_Os04g36810 LOC_Os01g54540 LOC_Os02g40000 More.. |
| Downstream Genes | LOC_Os10g38710 LOC_Os10g38580 LOC_Os10g38360 LOC_Os10g38340 LOC_Os09g29200 LOC_Os10g38160 LOC_Os10g38470 LOC_Os12g10604 LOC_Os10g38700 LOC_Os12g03090 LOC_Os11g03400 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00053 rn00480 rn01100 |
| Metacyc Pathways | PWY-2261 PWY-6370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12630.1 |
| Rice Genome Annotation | LOC_Os06g12630.1 |
| Ricechip | LOC_Os06g12630.1 |
| KEGG | osa:4340581 dosa:Os06t0232600-01 |
| Entrez-Gene | 4340581 |