RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g12790.3 View Network Show in Genome Browser |
| Other Names | Os06g0234200 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 6990939-6994556 Nucleotide Length: 333 |
| Protein-coding | LOC_Os06g12790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58730 LOC_Os02g20850 LOC_Os02g02840 LOC_Os05g28290 LOC_Os02g50860 LOC_Os01g73310 LOC_Os02g48730 LOC_Os05g01600 LOC_Os05g43820 LOC_Os05g41060 LOC_Os01g59790 More.. |
| Downstream Genes | LOC_Os06g21340 LOC_Os08g43130 LOC_Os09g27650 LOC_Os08g42000 LOC_Os11g06390 LOC_Os08g36390 LOC_Os10g36650 LOC_Os11g14220 LOC_Os07g31370 LOC_Os11g41910 LOC_Os12g05900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g12790.3 |
| Rice Genome Annotation | LOC_Os06g12790.3 |
| Ricechip | LOC_Os06g12790.3 |
| KEGG | osa:4340590 dosa:Os06t0234200-01 |
| Entrez-Gene | 4340590 |