RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g13560.1 View Network Show in Genome Browser |
| Other Names | Os06g0244000 |
| Description | SAM dependent carboxyl methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 7480067-7482194 Nucleotide Length: 1125 |
| Protein-coding | LOC_Os06g13560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53410 LOC_Os02g36840 |
| Downstream Genes | LOC_Os08g44270 LOC_Os07g07410 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167h-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g13560.1 |
| Rice Genome Annotation | LOC_Os06g13560.1 |
| Ricechip | LOC_Os06g13560.1 |
| KEGG | osa:4340632 dosa:Os06t0244000-01 |
| Entrez-Gene | 4340632 |