RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g13650.1 View Network Show in Genome Browser |
| Other Names | Os06g0245700 |
| Description | alpha-mannosidase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 7563724-7571102 Nucleotide Length: 3555 |
| Protein-coding | LOC_Os06g13650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53710 LOC_Os03g06230 LOC_Os04g56290 LOC_Os04g38530 LOC_Os03g26430 LOC_Os01g46950 LOC_Os04g31690 LOC_Os01g63420 LOC_Os05g49610 |
| Downstream Genes | LOC_Os09g17630 LOC_Os09g15820 LOC_Os12g10710 LOC_Os09g03620 LOC_Os06g42000 LOC_Os11g05130 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5513 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g13650.1 |
| Rice Genome Annotation | LOC_Os06g13650.1 |
| Ricechip | LOC_Os06g13650.1 |
| KEGG | osa:4340636 dosa:Os06t0245700-00 |
| Entrez-Gene | 4340636 |