RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g13670.1 View Network Show in Genome Browser |
| Other Names | Os06g0245900 |
| Description | E2F family transcription factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 7584780-7590605 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os06g13670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05760 LOC_Os01g62040 LOC_Os05g43820 |
| Downstream Genes | LOC_Os10g30420 LOC_Os07g08170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g13670.1 |
| Rice Genome Annotation | LOC_Os06g13670.1 |
| Ricechip | LOC_Os06g13670.1 |
| KEGG | osa:4340638 dosa:Os06t0245900-01 |
| Entrez-Gene | 4340638 |